Skip to main content

Release of 2019 New Coronavirus Resource Library

On January 22, 2020, the National Genomics Science Data Center officially released the 2019 new coronavirus resource library. 
The library integrates coronavirus genome sequence data and meta information published by the World Health Organization (WHO), the Chinese Center for Disease Control and Prevention (CDC), the National Center for Biotechnology Information (NCBI), and the Global Influenza Sequence Database (GISAID). 
Academic literature, news, popular science articles. At the same time, mutation analysis and display of the genome sequence of different coronavirus strains.

New Coronavirus (2019-nCoV) Resource Library

The 2019 New Coronavirus Resource Library contains meta information of the 2019 New Coronavirus (2019-nCoV) virus strains from the NCBI GenBank database and GISAID database, including the strain name, sampling date, sampling location, sample providing unit, data submission unit, etc.

Through this resource library, you can also access the Coronaviridae genome and protein sequences collected from the public database of the National Genome Science Data Center Genome Database GWH. 

Users can base on Accession number, species name, genus name, sampling date, sampling location, host, separation source, release date and other meta-information screen the corona virus strains of interest, and personalize the selected sequence to download to carry out relevant scientific research.

Coronavirus Resource Library will continue to update information

The 2019 new coronavirus resource library will continue to update meta information and genomic sequence data, and monitor the academic documents of 2019 new coronavirus and other coronaviruses published in NCBI's PubMed database in real time, and the news released by China News and Xinhuanet to update the world simultaneously.
The popular science introduction issued by WHO and the Chinese Center for Disease Control and Prevention provides resources and windows for users to carry out academic research, master scientific research progress, understand news and scientific knowledge.
Simulation Infographics for the Release of 2019 New Coronavirus Resource Library

The 2019 new coronavirus resource library carried out 2019-nCoV virus strain genome variation analysis based on different reference genome sequences, and statistically and visually displayed the results. 

Through the comparison of genome-wide sequence similarity and analysis of mutation sites, the degree of variation, variation region, and variation between 2019-nCoV virus strains, 2019-nCoV virus strains and SARS coronavirus, and SARS-like coronavirus bat strains are obtained for base details. 

According to data analysis, the 2019-nCoV genome sequence sequence similarity to the SARS virus outbreak in 2003 was 80%, which was similar to the Bat SARS-like coronavirus isolate bat-SL-CoVZC45 genome sequence sequence collected from domestic bats in February 2017.

The highest, the similarity is 88%. Genomic variation analysis of the 2019-nCoV virus strain can provide an important data foundation and decision support for tracing the source of the virus, tracking the mutation path of the virus strain, preventing and controlling the epidemic caused by the new coronavirus, and treating viral pneumonia.

2019 New Coronavirus Genome Variation Analysis

The reference genome for genome variation analysis is GenBank 2019 new coronavirus strain genome sequence MN908947.3, SARS-Cov is SARS coronavirus, bat-SL-CoVZC45 is SARS-like coronavirus bat strain. The rest of the genome sequence is derived from the 2019 new coronavirus strain released by GISAID. The red vertical line indicates the mutation site.




[[SHARE in Public Health Interest>>
Labels:
Location: United States

Comments

Post a Comment

Popular posts from this blog

How to Soften and Clean Blood Vessels?

The savior that softens the blood vessels is found, eat daily, remove garbage and blood vessels clean slowly The blood vessels are densely packed in the human body, and there are many branches, which are complicated. Blood supplies oxygen and oxygen to various organs and tissues through these blood vessels to ensure the health of the body. Once there is a problem with blood vessels, it will affect blood transport and cause abnormal phenomena, which is very detrimental to health. Among them, the occurrence of blood clots in blood vessels is very serious. It can cause hardening and blockage of blood vessels, which is extremely detrimental to the health of blood vessels. For providing or getting the Best Telehealth, Telegym services and fitness networking may log in to   fitcj .com   network   What is Blood Clot? It is often referred to as blood clot. In general, there are many reasons for the formation of thrombosis, mainly due to age. Sedentary inactivity, high stress in life,
Post a Comment
Read more

Organic Food in India Asia

  Organic food (Organic Foods) is also called ecological or biological food. Organic food is a relatively unified term for non-polluting natural food in the world. In India organic foods are getting popular at a very fast pace. Organic food usually comes from the organic agricultural production system and is produced and processed according to international organic agricultural production requirements and corresponding standards. In addition to organic food, some derivative products such as organic cosmetics, textiles, forest products or production materials provided by organic food, including biological pesticides and organic fertilizers, are collectively referred to as organic products after certification. Table of Contents 1. Definition ▪ Logo ▪ Differentiate 2. Main species ▪ Organic produce ▪ Judgment criteria 3. Apply for certification ▪ Certification requirements ▪ Organic certification mark ▪ Certification Difficulty
Post a Comment
Read more

What is Biomechanics?

    The field of biophysics known as biomechanics (bio-mechanics) uses the principles and techniques of mechanics to the quantitative analysis of mechanical issues in living beings. Its studies cover everything from entire organisms to systems and organs (including blood, body fluids, organs, bones, etc.), from bird flying and fish swimming to flagella and cilia movement to the movement of body fluids in plants. The three laws of energy, momentum, and mass conservation as well as the constitutive equations characterising physical attributes form the foundation of biomechanics. Research in biomechanics focuses on mechanical issues that are connected to physiology and medicine. It can be separated into motion biomechanics, biofluid mechanics, and biosolid mechanics depending on the various research objects.     Bio-mechanics belongs to the branch of biophysics. The research scope ranges from biological whole to systems and organs.   Table of Contents 1. O
Post a Comment
Read more